PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_007035-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 164aa    MW: 18401.7 Da    PI: 10.3232
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_007035-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32.1e-11253454
                   HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                   +h ++Er+RR+++N+ +  Lr+l P   +k  s K + a+i   ++e+Ik+L
  NNU_007035-RA  2 SHIAVERNRRKQMNEHLKVLRSLTPCfYVKKMSIKGDQASIIGGVIEFIKEL 53
                   89************************999*********************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-14177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.97E-11158No hitNo description
PROSITE profilePS5088814.195153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-8253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-13257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-8459IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MSHIAVERNR RKQMNEHLKV LRSLTPCFYV KKMSIKGDQA SIIGGVIEFI KELHQVLQSL  60
ESKKKRKSLS PSPSPRPLQL TPPPPDSPFV FENVKELGAC CNSPVADVEA KISGSNVILR  120
TISRRIPGQI VKIITILEKL AFEILHLNIS SMEDTVLYSF VIKV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010256206.11e-101PREDICTED: transcription factor MUTE
SwissprotQ9M8K61e-74MUTE_ARATH; Transcription factor MUTE
TrEMBLK4AXQ07e-90K4AXQ0_SOLLC; Uncharacterized protein
STRINGSolyc01g080050.2.12e-89(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.13e-62bHLH family protein